FastQCFastQC Report
Fri 1 Jul 2022
EGAF00005102358

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005102358
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences61176633
Sequences flagged as poor quality0
Sequence length30-150
%GC44

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
CCCTCCTTAGGCAACCTGGTGGTCCCCCGCTCCCGGGAGGTCACCATATT1516620.2479083803124634No Hit
CCCCTCCTTAGGCAACCTGGTGGTCCCCCGCTCCCGGGAGGTCACCATAT1477680.24154320490308773No Hit
GTCTGGAGTCTTGGAAGCTTGACTACCCTACGTTCTCCTACAAATGGACC1103480.18037605959778794No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)