FastQCFastQC Report
Thu 16 Jun 2022
EGAF00005102522

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005102522
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences80068281
Sequences flagged as poor quality0
Sequence length30-150
%GC45

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
CCCTCCTTAGGCAACCTGGTGGTCCCCCGCTCCCGGGAGGTCACCATATT1957050.2444226322281104No Hit
CCCCTCCTTAGGCAACCTGGTGGTCCCCCGCTCCCGGGAGGTCACCATAT1890810.23614969328491017No Hit
GTCTGGAGTCTTGGAAGCTTGACTACCCTACGTTCTCCTACAAATGGACC1150580.1436998503814513No Hit
GCTCCGTTTCCGACCTGGGCCGGTTCACCCCTCCTTAGGCAACCTGGTGG1147270.14328645322109512No Hit
CCTCCTTAGGCAACCTGGTGGTCCCCCGCTCCCGGGAGGTCACCATATTG978120.12216073428627748No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)