FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005103368

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005103368
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences2108226
Sequences flagged as poor quality0
Sequence length35-151
%GC42

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
GCTGCGC2850.005618785529.465181145
GACGTGT3303.6670826E-922.6979922
CGGCTGA4506.526534E-918.1583942
TCCCGTT8451.9551252E-417.39143145
GCGGCTG7156.366463E-1014.2854491
AGACGTG5251.1592549E-512.9702811
GATGTCC11450.00195853412.834724145
CGTGTGC6851.4533689E-510.9347994
ACGTCTG8351.9428644E-610.056977145
TCCGATC1802.9073835E-59.07919710-14
CGGGGTT14201.7209313E-68.870679145
ACGTGTG7705.6434877E-48.8433733
GACGGGG15359.05311E-98.428571
ACGGGAT8300.00118911098.2040939
TGCAAGT26350.00158450587.9673395145
ACGGGGT13801.1187494E-67.89495332
TCCAGTC24750.0080370177.6341605145
TTCCGAT2502.0419653E-57.626525410-14
GTCTCGA17951.4420038E-77.2077196
AACGGGA10500.00149675587.1336548
Produced by FastQC (version 0.11.5)