FastQCFastQC Report
Sun 19 May 2024
EGAF00005103965

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005103965
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences117119132
Total Bases16.6 Gbp
Sequences flagged as poor quality0
Sequence length35-151
%GC52

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG8714260.7440509378092044No Hit
GTGTGAGGCCGGTAGCGGCCCCCGGCGCGCCGGGCCCGGGTCTTCCCGGA2213490.18899474084217086No Hit
GTGAGGCCGGTAGCGGCCCCCGGCGCGCCGGGCCCGGGTCTTCCCGGAGT1527060.1303851876224629No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.12.1)