Basic Statistics
Measure | Value |
---|---|
Filename | EGAF00005104612 |
File type | Conventional base calls |
Encoding | Sanger / Illumina 1.9 |
Total Sequences | 42840498 |
Total Bases | 2.1 Gbp |
Sequences flagged as poor quality | 0 |
Sequence length | 51 |
%GC | 49 |
Per base sequence quality
Per tile sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
Sequence | Count | Percentage | Possible Source |
---|---|---|---|
ATCGGAAGAGCACACGTCTGAACTCCAGTCACTAATGCGCATCTCGTATG | 760487 | 1.775159102959074 | TruSeq Adapter, Index 3 (97% over 35bp) |
CCCGTATCGAAGGCCTTTTTGGACAGGTGGTGTGTGGTGGCCTTGGTATG | 82218 | 0.19191653654446314 | No Hit |
GTGGGCTACAACGTAGTACGTGTCGTGTAGTACGATGTCTAGTGATGAGT | 45553 | 0.10633163041195272 | No Hit |
CTGCTGTTAGAGAAATGAATGAGCCTACAGATGATAGGATGTTTCATGTG | 45338 | 0.10582976883228574 | No Hit |