Basic Statistics
Measure | Value |
---|---|
Filename | EGAF00005104626 |
File type | Conventional base calls |
Encoding | Sanger / Illumina 1.9 |
Total Sequences | 50893090 |
Total Bases | 2.5 Gbp |
Sequences flagged as poor quality | 0 |
Sequence length | 51 |
%GC | 48 |
Per base sequence quality
Per tile sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
Sequence | Count | Percentage | Possible Source |
---|---|---|---|
ATCGGAAGAGCACACGTCTGAACTCCAGTCACTCCGGAGAATCTCGTATG | 284707 | 0.5594217211020199 | TruSeq Adapter, Index 6 (97% over 35bp) |
CCCGTATCGAAGGCCTTTTTGGACAGGTGGTGTGTGGTGGCCTTGGTATG | 75144 | 0.14765069285437374 | No Hit |
CTGCTGTTAGAGAAATGAATGAGCCTACAGATGATAGGATGTTTCATGTG | 61024 | 0.11990625839382126 | No Hit |