EGAF00005104644 FastQC Report

Basic Statistics

Measure	Value
Filename	EGAF00005104644
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	54015998
Sequences flagged as poor quality	0
Sequence length	51
%GC	48

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
ATCGGAAGAGCACACGTCTGAACTCCAGTCACATTACTCGATCTCGTATGC	613215	1.1352470058962902	TruSeq Adapter, Index 27 (97% over 38bp)
CCCGTATCGAAGGCCTTTTTGGACAGGTGGTGTGTGGTGGCCTTGGTATGT	73951	0.13690573670415196	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
TCGTATG	70740	42.925915	44
CGTATGC	71095	42.800175	45
TTACTCG	71050	42.60754	34
CTCGTAT	71905	42.09558	43
ACACGTC	73080	41.967175	12
ACGTCTG	73270	41.759438	14
TCTCGTA	69305	41.081074	42
TCGGAAG	76055	40.96092	2
ACATTAC	74470	40.936337	31
ATCTCGT	69590	40.89305	41
CACACGT	75490	40.62142	11
CGGAAGA	76460	40.55882	3
CACGTCT	75835	40.401024	13
ATTACTC	75585	40.33398	33
CGTCTGA	75755	40.312393	15
ATCGGAA	77145	40.01801	1
GCACACG	76915	39.95658	10
CTCGATC	71215	39.87718	37
CATTACT	76415	39.754562	32
GATCTCG	71920	39.586052	40