FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005104750

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005104750
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences20590710
Sequences flagged as poor quality0
Sequence length151
%GC43

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
TTACGCG14050.084.097059
TGCGCGA33800.078.1510541
CGGTACG28900.076.125551
CGCCGAA30750.075.613451
ACGACCG33500.074.677751
TTTGCGC33100.073.801841
GCGCTAG35550.068.508661
TTACCCG39450.067.890891
TTCCGCG18450.066.7916267
CGAACGC39900.066.203151
GCGCGTA34500.065.688411
GTGCGAC33400.064.3270341
TAGGCGC35100.064.146281
TCGTACG39400.064.025438
GTTACGC33000.063.702078
ATAACGC38400.063.4240381
TCACGCG27900.063.395018
CGAACTA45550.063.3220251
GTTCGCG41100.063.3172578
TCCGCGA33950.062.9871188
Produced by FastQC (version 0.11.5)