FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005104761

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005104761
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences19540981
Sequences flagged as poor quality0
Sequence length151
%GC43

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
TTACGCG11900.091.982079
TGCGCGA31550.078.847151
TTTGCGC33600.078.636441
ACGACCG31150.076.551831
CGCCGAA31600.074.2971651
GCGCTAG32800.072.476521
GACGCGT30900.071.45481
CGGTACG30100.070.90881
CGAACGC37450.070.748841
GTGCGAC34350.068.9918441
CGTTGCG13800.067.761637
TCGCGAT22500.067.0122158
GTTACGC31300.065.772938
ACGCCGA37750.065.117561
GGCGACT38350.064.48261
GTACCGT47550.063.8758478
CTTACCG41950.063.510461
TAGGCGC37100.063.282761
CGCGGTA38250.062.5346261
ATAACGC36250.062.330271
Produced by FastQC (version 0.11.5)