FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005104773

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005104773
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences17225429
Sequences flagged as poor quality0
Sequence length151
%GC42

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
TGCGCGA26150.079.934621
TTTGCGC28550.077.855471
TTACGCG10000.077.559889
ACGACCG25950.077.147141
CGGTACG26250.073.741971
CGAACGC30950.072.056021
CGCCGAA26650.071.806611
GTGCGAC32500.070.657711
CCGCTAT36100.069.7281
ATAACGC32250.068.923221
GACGCGT24900.067.39441
GCGCGTA25700.066.442081
GGCGACT35150.065.749531
CGCGGTA33750.065.4238051
TTACCCG33650.065.39951
CGAACTA36600.064.351281
TCGTACG34300.064.244058
ACGCCGA34200.063.917331
GCGCTAG27100.063.824421
CCTTACG32150.063.4142841
Produced by FastQC (version 0.11.5)