FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005104788

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005104788
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences19106638
Sequences flagged as poor quality0
Sequence length8
%GC37

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
AACTTGAC1836341896.11014768793966No Hit
NACTTGAC3259841.7061295660701792No Hit
ANCTTGAC428760.22440368630001784No Hit
AACTTGCC361150.1890180784290779No Hit
CACTTGAC360890.1888820000672018No Hit
AGCTTGAC297280.15558990545589443No Hit
ACCTTGAC247860.12972454913313375No Hit
AACTTGGC238280.12471058487631367No Hit
GACTTGAC236650.12385747822301338No Hit
TACTTGAC229420.12007345300622746No Hit
AACTTGAA202030.10573812096089327No Hit

[WARN]Adapter Content

Can't analyse adapters as read length is too short

[OK]Kmer Content

No overrepresented Kmers

Produced by FastQC (version 0.11.5)