FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005104807

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005104807
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences18472953
Sequences flagged as poor quality0
Sequence length151
%GC43

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
TTACGCG11200.084.135759
TTTGCGC29050.084.028131
CGCCGAA30050.076.093691
TGCGCGA26800.075.993721
ACGACCG25200.071.482261
GTGCGAC35450.071.346871
GCGCTAG30650.070.5260541
GACGCGT28050.069.9859851
CGTTGCG13500.068.728587
CGGTACG25500.068.334631
TTACCCG38550.067.3260351
GCGCGTA30600.067.277421
ATAACGC32500.066.059031
CCTTACG34600.065.662151
GGCGACT37200.065.223441
CCGCTAT33450.064.4027251
CGAACGC32900.064.361971
TCCGCGA28500.064.348268
CGAACTA37450.063.6100731
GCCGGAT34400.063.265361
Produced by FastQC (version 0.11.5)