FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005104832

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005104832
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences16160868
Sequences flagged as poor quality0
Sequence length151
%GC42

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
ACGACGC24500.099.421735
CACGACG25100.097.045414
CGACGCT25100.096.757186
GACGCTC34400.070.1775057
TACACGA38050.065.3883362
CTACACG40800.061.322421
ACACGAC42750.057.8303643
ACGCTCT42450.057.724378
CGCTCTT52350.046.8080189
CGCTGAG32800.08.5253111
CGCAAAG23501.1872544E-86.88898661
CGTAGAG24352.4079782E-86.64850851
TCTTCCG91100.06.589167610-14
CGATAGG12700.00489430556.37366871
CTTCCGA104300.06.00548410-14
AACGGGG28257.035487E-85.99114561
TAACCCT532650.05.60747586
CTAACCC560450.05.5491765
CCCTAAC577900.05.46980053
CCTAACC580250.05.43479974
Produced by FastQC (version 0.11.5)