FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005104844

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005104844
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences19106638
Sequences flagged as poor quality0
Sequence length151
%GC43

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
TGCGCGA26750.082.187921
TTACGCG11500.080.6796659
CGGTACG28750.078.005021
CGCCGAA28600.076.871571
ACGACCG28050.076.54391
TTTGCGC31550.076.209471
GTGCGAC33400.075.950941
GCGCTAG34450.069.794171
GACGCGT29850.069.464881
CGAACGC34950.066.9022141
ATAACGC36800.066.7358551
CCGCTAT38050.066.089431
TTACCCG35700.065.496711
GCGCGTA28650.064.6751
GGCGACT41500.063.7844731
GTACCGT41150.063.414098
GCCGGAT37650.062.8856351
CCTTACG36850.062.6545641
ACGCCGA38300.062.0103721
GTTACGC27250.061.9787038
Produced by FastQC (version 0.11.5)