FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005104847

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005104847
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences18514992
Sequences flagged as poor quality0
Sequence length151
%GC42

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CGACGCT24500.093.2085956
ACGACGC26000.088.3878865
CACGACG28150.081.122714
GACGCTC37500.061.476257
TACACGA40500.057.1383362
CTACACG41800.056.1545221
ACGCTCT43050.053.38328
ACACGAC46500.049.7371523
CGCTCTT58400.039.9725239
AACGGGG33704.9112714E-116.3319641
GTTCCGA54550.05.8474265
CGCTGAG39306.91216E-115.80416151
TAACCCT751250.05.79964546
AACCCTA807650.05.6303531
TCTTCCG103250.05.61723910-14
CTAACCC798800.05.60863545
ACCCTAA828900.05.5047862
CCCTAAC834550.05.44701243
CCTAACC828350.05.43485644
CGCTGAT27258.267636E-65.40049841
Produced by FastQC (version 0.11.5)