EGAF00005105148 FastQC Report

Basic Statistics

Measure	Value
Filename	EGAF00005105148
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	27686400
Sequences flagged as poor quality	0
Sequence length	35-76
%GC	52

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GGTGGCGCGTGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGCTGGAGGA	80472	0.29065533980582525	No Hit
GTGGCGCGTGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGCTGGAGGAT	68820	0.24856969486823857	No Hit
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG	68118	0.24603415395284328	No Hit
GGTGGCGCGTGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGTGGGAGGA	62295	0.22500216712898752	No Hit
GTGGCGCGTGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGTGGGAGGAT	52532	0.18973936662043459	No Hit
GTTCTGGGCTGTAGTGCGCTATGCCGATCGGGTGTCCGCACTAAGTTCGG	52481	0.1895551606564956	No Hit
GGCGCGTGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGCTGGAGGATCGCTTGAGTCCAGGAGTTCTGGGCTGT	45150	0.1630764563106796	No Hit
CGGTGGCGCGTGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGCTGGAGG	44626	0.16118383032824782	No Hit
GGGCGATCTGGCTGCGACATCTGTCACCCCATTGATCGCCAGGGTTGATT	40008	0.14450416088765602	No Hit
GTGCGCTATGCCGATCGGGTGTCCGCACTAAGTTCGGCATCAATATGGTGACCTCCCGGGAGCGGGGGACCACC	39965	0.14434884997688396	No Hit
CCCAAACCCACTCCACCTTACTACCAGACAACCTTAGCCAAACCATTTAC	37530	0.13555391816920942	No Hit
CGGTGGCGCGTGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGTGGGAGG	35086	0.12672647942672213	No Hit
GGCGCGTGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGTGGGAGGATCGCTTGAGCCCAGGAGTTCTGGGCTGT	34649	0.12514808714748035	No Hit
GGGGACCACCAGGTTGCCTAAGGAGGGGTGAACCGGCCCAGGTCGGAAACGGAGCAGGTCAAAACTCCCGTGCTG	32589	0.11770761095700416	No Hit
GGAGTTCTGGGCTGTAGTGCGCTATGCCGATCGGGTGTCCGCACTAAGTT	30120	0.10878987517337031	No Hit
CTTGAGTCCAGGAGTTCTGGGCTGTAGTGCGCTATGCCGATCGGGTGTCC	29999	0.10835283749422099	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
GGGCGAT	6565	45.662086	1
GGTGGCG	31410	36.824554	1
GGCGATC	8235	36.25138	2
GCGATCT	9155	32.32832	3
CGGTGGC	21780	29.379416	1
CGATCTG	10140	29.32127	4
TGGGGGG	31785	29.190853	1
GTACGCA	2165	29.054281	48
GTAGTAC	2845	28.083761	15
TGGCGCG	41960	27.411045	3
GTGGCGC	43640	26.502909	2
CTAGCCT	5030	22.86941	2
GGCGCGT	52295	21.73202	4
TCTATTA	5250	21.570538	10
AGTAGTA	3595	21.258162	14
TGCGACA	13945	21.074444	13
GCGACAT	14080	20.872267	14
TGTACGC	2670	20.694424	47
GTGTACG	2720	20.440851	46
GGATAGC	5380	20.41241	48