EGAF00005105152 FastQC Report

Basic Statistics

Measure	Value
Filename	EGAF00005105152
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	25034041
Sequences flagged as poor quality	0
Sequence length	35-76
%GC	54

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG	161844	0.646495705587444	No Hit
GGTGGCGCGTGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGCTGGAGGA	55460	0.22153834452855614	No Hit
GTTCTGGGCTGTAGTGCGCTATGCCGATCGGGTGTCCGCACTAAGTTCGG	46274	0.18484430859564382	No Hit
GTGGCGCGTGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGCTGGAGGAT	44447	0.1775462459296923	No Hit
GGTGGCGCGTGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGTGGGAGGA	43422	0.17345182106236864	No Hit
GGGGACCACCAGGTTGCCTAAGGAGGGGTGAACCGGCCCAGGTCGGAAACGGAGCAGGTCAAAACTCCCGTGCTG	38342	0.15315945196382796	No Hit
GGTCGACCCGTGCGGAGGAGCGAGGAGGAAGGACGCGCGAGGGCCGGGAC	35744	0.14278158288547982	No Hit
GTGGCGCGTGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGTGGGAGGAT	34276	0.13691756756330312	No Hit
GTGCGCTATGCCGATCGGGTGTCCGCACTAAGTTCGGCATCAATATGGTGACCTCCCGGGAGCGGGGGACCACC	32795	0.13100162295012618	No Hit
GTCGACCCGTGCGGAGGAGCGAGGAGGAAGGACGCGCGAGGGCCGGGACC	30299	0.1210311990780873	No Hit
GGCGCGTGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGCTGGAGGATCGCTTGAGTCCAGGAGTTCTGGGCTGT	25538	0.1020130948894747	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
GGTGGCG	20875	38.499767	1
GTAGTAC	2370	37.653824	15
GGGCGAT	4605	36.082367	1
GCGATCT	4905	32.916588	3
GGCGATC	5110	32.28942	2
CGATCTG	5485	29.433065	4
TGGCGCG	27600	28.846682	3
TTGCGAC	530	28.167725	4
CTAGCCT	3225	28.004715	2
GTGGCGC	29175	27.467823	2
TGGGGGG	45260	27.242277	1
AGTAGTA	2790	27.006948	14
GTACGCA	1585	24.563723	48
TCTATTA	3845	23.479845	10
GGCGCGT	34900	22.711178	4
TGCAGGT	8875	22.45662	3
TAGCGTG	870	21.58353	51
CTTAGTA	4120	21.490927	20
AGGTCGA	8925	21.396479	6
TAGTAAG	4215	21.088634	22