FastQCFastQC Report
Tue 26 Jul 2022
EGAF00005106156

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005106156
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences2429994
Sequences flagged as poor quality0
Sequence length101
%GC44

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG434111.7864653163752668No Hit
GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT34500.14197565919915853No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)