FastQCFastQC Report
Thu 28 Jul 2022
EGAF00005106195

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005106195
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences3721412
Sequences flagged as poor quality0
Sequence length101
%GC44

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
CTTATACACATCTCCGAGCCCACGAGACTAGGCATGATCTCGTATGCCGT84940.22824669775880768No Hit
ATACACATCTCCGAGCCCACGAGACTAGGCATGATCTCGTATGCCGTCTT51210.13760905806720675TruSeq Adapter, Index 1 (95% over 21bp)
GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT41620.11183926961056717No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)