FastQCFastQC Report
Mon 25 Jul 2022
EGAF00005106268

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005106268
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences82730
Sequences flagged as poor quality0
Sequence length101
%GC58

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG2233026.991417865345095No Hit
GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT1480.17889520125710143No Hit
GTCCTAAAGTGTGTATTTCTCATTATCCGTGATTTTCAGTTTTCTCGCCA950.11483137918530159No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)