FastQCFastQC Report
Sat 6 Aug 2022
EGAF00005106712

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005106712
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences269228
Sequences flagged as poor quality0
Sequence length101
%GC59

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG4717417.521951654359874No Hit
GTATGTAGACGGGGTACGTGCCAAGCATCCTCGTGCGACCGCGAGAGCCC10480.3892611466860802No Hit
GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT9830.3651180412141382No Hit
GGGCAGTGGTGGGTGCTTTATTTCCATGCTGGGTGCCTGGGAAGTATGTA8380.31126034439211375No Hit
TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT7000.2600026743132215No Hit
CTTTATTTCCATGCTGGGTGCCTGGGAAGTATGTAGACGGGGTACGTGCC5930.22025940838248625No Hit
CATTTACCCGGGGACAGGGAGAGGCTCTTCTGCGTGTAGTGGTTGTGCAG5860.217659381639354No Hit
GTGCAGGGAGAAGGGCTGGATGACTTGGGATGGGGAGAGAGACCCCTCCC5780.2146879225043458No Hit
TTATTGGGGTTTCATGAGTGCAGGGAGAAGGGCTGGATGACTTGGGATGG5490.20391638313994087No Hit
GTGGTGGGTGCTTTATTTCCATGCTGGGTGCCTGGGAAGTATGTAGACGG4990.18534476354613935No Hit
GGATATTTATTGGGGTTTCATGAGTGCAGGGAGAAGGGCTGGATGACTTG4900.18200187201925505No Hit
GTTTGGAGGGTTTGGTGGTCTCCACTCCCGCCTTGACGGGGCTGCCATCT4870.18088757484362697No Hit
CTACAAGACCACGCCTCCCGTGCTGGACTCCGACGGCTCCTTCTTCCTCT4820.17903041288424681No Hit
GGGTACGTGCCAAGCATCCTCGTGCGACCGCGAGAGCCCGGGGAGCGGGG4690.17420179178985842No Hit
ATGTAGACGGGGTACGTGCCAAGCATCCTCGTGCGACCGCGAGAGCCCGG4070.1511729834935445No Hit
GTGTACACCTGTGGTTCTCGGGGCTGCCCTTTGGCTTTGGAGATGGTTTT4000.1485729567504123No Hit
GGGTAAATGAGTGCGACGGCCGGCAAGCCCCCGCTCCCCGGGCTCTCGCG3970.1474586595747842No Hit
GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT3890.14448720043977595No Hit
GTATATGAGTTGCAGTAGTAGTCAGCCTCGTCCTCAGCCTGGAGCCCAGA3710.1378014173860074No Hit
ACACTAGTGTGTCTGATCAGTGACTTCTACCCGGGAGCTGTGACAGTGGC3620.13445852585912313No Hit
CTGCACAACCACTACACGCAGAAGAGCCTCTCCCTGTCCCCGGGTAAATG3600.13371566107537106No Hit
TTTCCATGCTGGGTGCCTGGGAAGTATGTAGACGGGGTACGTGCCAAGCA3560.13222993150786694No Hit
GTTCATAGGTTCCCAACTCTAACCCCACCCACGGGAGCCTGGAGCTGCAG3450.1281441751972306No Hit
CCACTACACGCAGAAGAGCCTCTCCCTGTCCCCGGGTAAATGAGTGCGAC3450.1281441751972306No Hit
CCTCTGAGGAGCTCCAAGCCAACAAGGCCACACTAGTGTGTCTGATCAGT3320.1233155541028422No Hit
CCTCCAAACAGAGCAACAACAAGTACGCGGCCAGCAGCTACCTGAGCCTG3310.12294412171096618No Hit
CCTCAGAGGAGGGCGGGAACAGAGTGACAGTGGGGTTGGCCTTGGGCTGA3250.12071552735971No Hit
CACTAGTGTGGCCTTGTTGGCTTGGAGCTCCTCAGAGGAGGGCGGGAACA3160.11737263583282571No Hit
GTCTTGTAGTTGTTCTCCGGCTGCCCATTGCTCTCCCACTCCACGGCGAT3110.11551547387344556No Hit
GTTGTGCAGAGCCTCATGCATCACGGAGCATGAGAAGACGTTCCCCTGCT3090.11477260908969349No Hit
GGTGTACACCCTGCCCCCATCCCGGGAGGAGATGACCAAGAACCAGGTCA3050.11328687952218937No Hit
TCCCAGGGCAGTGGTGGGTGCTTTATTTCCATGCTGGGTGCCTGGGAAGT2990.11105828517093319No Hit
GCAGTGGTGGGTGCTTTATTTCCATGCTGGGTGCCTGGGAAGTATGTAGA2990.11105828517093319No Hit
CTCATGCTCCGTGATGCATGAGGCTCTGCACAACCACTACACGCAGAAGA2950.10957255560342907No Hit
GCATGAGGCTCTGCACAACCACTACACGCAGAAGAGCCTCTCCCTGTCCC2940.10920112321155304No Hit
GGGTTAGAGTTGGGAACCTATGAACATTCTGTAGGGGCCACTGTCTTCTC2910.10808682603592494No Hit
GCCTCATGCATCACGGAGCATGAGAAGACGTTCCCCTGCTGCCACCTGCT2890.1073439612521729No Hit
CTTCATGCGTGACCTGGCAGCTGTAGCTTCTGTGGGACTTCCACTGCTCG2860.1062296640765448No Hit
CTCTAACCCCACCCACGGGAGCCTGGAGCTGCAGGATCCCAGGGGAGGGG2790.10362963733341257No Hit
CCCTGTCCCCGGGTAAATGAGTGCGACGGCCGGCAAGCCCCCGCTCCCCG2730.10140104298215638No Hit
GTCAATGAGGATATTTATTGGGGTTTCATGAGTGCAGGGAGAAGGGCTGG2720.10102961059028036No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)