FastQCFastQC Report
Thu 28 Jul 2022
EGAF00005107414

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005107414
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences2152924
Sequences flagged as poor quality0
Sequence length101
%GC54

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG43950.20414097292798072No Hit
CACACACACACACACACACACACACACACACACACACACACACACACACA24980.11602824809421976No Hit

[WARN]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)