FastQCFastQC Report
Thu 28 Jul 2022
EGAF00005107699

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005107699
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences5204758
Sequences flagged as poor quality0
Sequence length101
%GC51

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GTAATAAACGGCCGTATCCTCGGCTGTCAGGTTGCTCATCTGCAGATACA244250.4692821452985903No Hit
ATCACATACTACGCAGACTCCGTGAAGGACCGGTTCACCATCTCCAGAGA181380.34848882503278733No Hit
GTTTATTACTGTGCGAAAGGACCTTTTTGGAGTGGTCGTTATACCCACAA170210.32702769273806775No Hit
GTATGTGATATGACCACGACCACTAATAGTTGAGACCCACTCCAGCCCCT109470.2103267817639168No Hit
GGTGTACACCCTGCCCCCATCCCGGGAGGAGATGACCAAGAACCAGGTCA92170.1770879645124711No Hit
TCCTAGGTCAGCCCAAGGCTGCCCCCTCGGTCACTCTGTTCCCACCCTCC91520.17583910721689655No Hit
GTCCTACAGTCCTCAGGACTCTACTCCCTCAGCAGCGTGGTGACCGTGCC90370.1736295904631877No Hit
CTGTAGGACAGCCGGGAAGGTGTGCACGCCGCTGGTCAGGGCGCCTGAGT87060.16727002485033887No Hit
GATGTACACTGGTACCGGCAGCTTTCACGAACAGCCCCCAAACTCTTCAT84090.1615637076690213No Hit
GTACAACAGCACGTACCGTGTGGTCAGCGTCCTCACCGTCCTGCACCAGG79730.1531867571940905No Hit
GTATGTAGACGGGGTACGTGCCAAGCATCCTCGTGCGACCGCGAGAGCCC79040.15186104714186519No Hit
GTGGTGGACGTGAGCCACGAAGACCCTGAGGTCAAGTTCAACTGGTACGT76860.14767257190439978No Hit
GGTTATGATGTACACTGGTACCGGCAGCTTTCACGAACAGCCCCCAAACT76170.1463468618521745No Hit
GTACGTGCTGTTGTACTGCTCCTCCCGCGGCTTTGTCTTGGCATTATGCA75570.14519407050241337No Hit
CTCCTGCACTGGGAGCAGCTCCAACATCGGGGCAGGTTATGATGTACACT73870.14192782834475684No Hit
CTACGCAGACTCCGTGAAGGACCGGTTCACCATCTCCAGAGACACTTCCA73520.14125536672406286No Hit
CTATTAGTGGTCGTGGTCATATCACATACTACGCAGACTCCGTGAAGGAC72410.13912270272700478No Hit
TTTTTGGAGTGGTCGTTATACCCACAACTTTGACGACTGGGGCCAGGGAA72080.13848866748463617No Hit
GTTCCCACCCTCCTCTGAGGAGCTTCAAGCCAACAAGGCCACACTGGTGT70370.13520321213781697No Hit
CCTATGAACATTCTGTAGGGGCCACTGTCTTCTCCACGGTGCTCCCTTCA70160.13479973516540059No Hit
CTACAAGACCACGCCTCCCGTGCTGGACTCCGACGGCTCCTTCTTCCTCT70140.1347613087870752No Hit
CCTTCCCGGCTGTCCTACAGTCCTCAGGACTCTACTCCCTCAGCAGCGTG69900.13430019224717077No Hit
CTCCAAAAAGGTCCTTTCGCACAGTAATAAACGGCCGTATCCTCGGCTGT69720.13395435484224244No Hit
TTTAAAAGGTGTCCAGTGTGAGGTGCAGCTGTTGGAGTCTGGGGGAGGCT68840.13226359419592612No Hit
CTGTTGTACTGCTCCTCCCGCGGCTTTGTCTTGGCATTATGCACCTCCAC66390.1275563628510682No Hit
CCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACTTTTGTCAGCTATGCC64770.12444382620671317No Hit
TATCACATACTACGCAGACTCCGTGAAGGACCGGTTCACCATCTCCAGAG64360.12365608545104306No Hit
CTCCTGTGCAGCCTCTGGATTCACTTTTGTCAGCTATGCCATGAGCTGGG62590.12025535096924775No Hit
GTGTGAGGTGCAGCTGTTGGAGTCTGGGGGAGGCTTGGTCCAGCCTGGGG61590.11833403205297921No Hit
GAACAGAGAGAACTCACCATGGAGTTTGGGCTGAGCTGGCTTTTTCTTGT61450.11806504740470161No Hit
CCCTCATGATCTCCCGGACCCCTGAGGTCACATGCGTGGTGGTGGACGTG61420.11800740783721357No Hit
CTGTATCTGCAGATGAGCAACCTGACAGCCGAGGATACGGCCGTTTATTA61410.11798819464805088No Hit
GGTTTATTGAGTGCAGGGAGAAGGGCTTGATGCCTTGGGGTGGGAGGAGA61410.11798819464805088No Hit
GTTTGGAGGGTGTGGTGGTCTCCACTCCCGCCTTGACGGGGCTGCTATCT61350.11787291551307477No Hit
GGACTGAACAGAGAGAACTCACCATGGAGTTTGGGCTGAGCTGGCTTTTT60360.11597080978596891No Hit
GACCTACATCTGCAACGTGAATCACAAGCCCAGCAACACCAAGGTGGACA60330.11591317021848087No Hit
CCTCTGAGGAGCTTCAAGCCAACAAGGCCACACTGGTGTGTCTCATAAGT59270.11387657216723622No Hit
ATACTACGCAGACTCCGTGAAGGACCGGTTCACCATCTCCAGAGACACTT59260.11385735897807353No Hit
TATTTATTGAGGGTTTATTGAGTGCAGGGAGAAGGGCTTGATGCCTTGGG58340.11208974557510648No Hit
TTTTAAAAGGTGTCCAGTGTGAGGTGCAGCTGTTGGAGTCTGGGGGAGGC57650.1107640355228812No Hit
GGGCAGTGGTGGGTGCTTTATTTCCATGCTGGGTGCCTGGGAAGTATGTA57210.10991865519972303No Hit
GCCCAGGGCCGCTGTGCCCCCAGAGGTGCTCTTGGAGGAGGGTGCCAGGG56880.1092846199573544No Hit
TCATGAGGGTGTCCTTGGGTTTTGGGGGGAAGAGGAAGACTGACGGTCCC56310.10818946817508135No Hit
TTATTACTGTGCGAAAGGACCTTTTTGGAGTGGTCGTTATACCCACAACT54690.10507693153072632No Hit
GACCTAGGACGGTCAGCTTGGTCCCTCCGCCGAATACCCAACCACTCAGG52960.10175304980558172No Hit
GCTGAGGGAGTAGAGTCCTGAGGACTGTAGGACAGCCGGGAAGGTGTGCA52600.10106137499572507No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)