FastQCFastQC Report
Thu 28 Jul 2022
EGAF00005108055

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005108055
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences2780355
Sequences flagged as poor quality0
Sequence length101
%GC47

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
CTTATACACATCTCCGAGCCCACGAGACCGAGGCTGATCTCGTATGCCGT49740.1788980184185113No Hit
GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT39900.14350685434054283No Hit
CTTATACACATCTCCGAGCCCACGAGACCGAGGCTGATCGCGTATGCCGT31220.11228781936119668No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)