FastQCFastQC Report
Tue 26 Jul 2022
EGAF00005108353

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005108353
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences1325999
Sequences flagged as poor quality0
Sequence length101
%GC45

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT19750.1489443053878623No Hit
CTTATACACATCTCCGAGCCCACGAGACCGGAGCCTATCTCGTATGCCGT18420.13891413191111004No Hit
CTTATACACATCTCCGAGCCCACGAGACCGGAGCCTATCGCGTATGCCGT13870.10460038054327342No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)