FastQCFastQC Report
Thu 28 Jul 2022
EGAF00005108418

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005108418
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences1610278
Sequences flagged as poor quality0
Sequence length101
%GC50

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG80820.501900914003669No Hit
CTCCTGGGAGTTACCCGATTGGAGGACGTTATCCACCTTCCACTGTACTT39060.24256681144498032No Hit
CTCTAACACTCTCCCCTGTTGAAGCTCTTTGTGACGGGCGAGCTCAGGCC27480.1706537628906313No Hit
GTGTACACCTGTGGTTCTCGGGGCTGCCCTTTGGCTTTGGAGATGGTTTT23920.1485457790518159No Hit
ATGTATTACTGTGCCCTCCAAAGATATTGTATTCGTCACGACTGTTCGGA22320.13860960653998874No Hit
GTATGTAGACGGGGTACGTGCCAAGCATCCTCGTGCGACCGCGAGAGCCC21130.1312195782343173No Hit
GTATTACTGTGCCCTCCAAAGATATTGTATTCGTCACGACTGTTCGGACT20880.1296670512793443No Hit
TCCATAAACACCGCCTACTTACAGTTCAGTAGGCTGAAGTCCTCGGACAC19840.12320853914665666No Hit
TCCATACCCTTTCCCGTCGGGCCTCGGGAGTCCCTGACAGATTTAATGGC19500.12109710248789339No Hit
CTTATAGTCCGTCCTTCGAAGGCCAGGTCACCTTCTCAGTCGACACGTCC19110.11867516043813553No Hit
GTAATACATGGCGGTGTCCGAGGACTTCAGCCTACTGAACTGTAAGTAGG19050.118302553968942No Hit
GGTGTACACCCTGCCCCCATCCCGGGAGGAGATGACCAAGAACCAGGTCA18620.11563220760638845No Hit
CTATTGGATCGCCTGGGTACGCCAGACGCCCGAGAAAGGCCTGGAGTGGA18140.11265135585284032No Hit
CTCTGGGATAGAAGTTATTCAGCAGGCACACAACAGAGGCAGTTCCAGAT17930.111347233210663No Hit
GTTGGAGACCTTGCACTTGTACTCCTTGCCATTCAGCCAGTCCTGGTGCA17540.10892529116090514No Hit
GTACGTGCTGTTGTACTGCTCCTCCCGCGGCTTTGTCTTGGCATTATGCA17510.10873898792630839No Hit
TTACTACTGCATGCAACGTAAAGAGTTTCCGATTACCTTCGGCCAAGGGA17420.1081800782225181No Hit
GATCAGGACTCCTCAGTTCACCTCCTCACCATGAGGCTCCCTGCTCAGCT17180.10668965234574403No Hit
CCCCTGGAGAGCCGGCCTCCATTTCCTGCAGCTCTAGCCAGAGCCTCTTG16400.10184576824622828No Hit
CTGTTGTACTGCTCCTCCCGCGGCTTTGTCTTGGCATTATGCACCTCCAC16300.10122475746423909No Hit
GGGCAGTGGTGGGTGCTTTATTTCCATGCTGGGTGCCTGGGAAGTATGTA16140.10023114021305637No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)