FastQCFastQC Report
Tue 26 Jul 2022
EGAF00005108656

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005108656
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences2365566
Sequences flagged as poor quality0
Sequence length101
%GC50

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG78030.3298576323805804No Hit
CTCCTGGGAGTTACCCGATTGGAGGGCGTTATCCACCTTCCACTGTACTT54860.23191067169548427No Hit
CTATATGCACTGGGTGCGACAGGCCCCTGGACAAGGGCTTGAGTGGATGG44170.18672064106433725No Hit
CTCTAACACTCTCCCCTGTTGAAGCTCTTTGTGACGGGCGAGCTCAGGCC42260.1786464634679396No Hit
GTAATACACGGCCGTGTCGTCAGATCTCAGCCTGCTCAGCTCCATATAAG41580.1757718871508975No Hit
GTATGTACACGGGGTACGTGCCAAGCATCCTCGTGCGACCGCGAGAGCCC34750.14689930443707763No Hit
GTGTACACCTGTGGTTCTCGGGGCTGCCCTTTGGCTTTGGAGATGGTTTT27700.1170967117383324No Hit
ATGCTACATCCAGTTTGCAAAGTGGGGTCCCATCAAGGTTCAGTGGCAGT26470.11189711045897684No Hit
GTAGGAGACAGAGTCACCATCACTTGCCGGGCAAGTCAGAGCATTAGCAG26400.11160119819104604No Hit
CTCTGGGATAGAAGTTATTCAGCAGGCACACAACAGAGGCAGTTCCAGAT26390.11155892500991306No Hit
GAGTTACAGTACCCCTCAAACTTTTGGCCAGGGGACCAAGCTGGAGATCA25490.10775433870794558No Hit
CCCCTATACCTTCTGCATAATGAATTAACTAGAAATAACTTTGCAAGGAG25020.1057674991946959No Hit
GGCGTAGACTTTGTGTTTCTCGTAGTCTGCTTTGCTCAGCGTCAGGGTGC24660.10424566467390892No Hit
GCTTATATGGAGCTGAGCAGGCTGAGATCTGACGACACGGCCGTGTATTA24550.1037806596814462No Hit
AGCATGTACTGCTCGGAGGTTGGGTTCTGCTCCGAGGTCGCCCCAACCGA24040.10162472744366464No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)