FastQCFastQC Report
Thu 28 Jul 2022
EGAF00005109384

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005109384
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences2959351
Sequences flagged as poor quality0
Sequence length101
%GC47

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG219990.7433724488916658No Hit
AGCATGTACTGCTCGGAGGTTGGGTTCTGCTCCGAGGTCGCCCCAACCGA37940.12820378522182735No Hit
GTATTAGAGGCACCGCCTGCCCAGTGACACATGTTTAACGGCCGCGGTAC33580.11347082519106386No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)