FastQCFastQC Report
Sat 6 Aug 2022
EGAF00005110049

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005110049
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences3098810
Sequences flagged as poor quality0
Sequence length101
%GC46

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
CTTATACACATCTCCGAGCCCACGAGACCCTAAGACATCTCGTATGCCGT42760.13798845363220075No Hit
GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT32390.10452399469473765No Hit
AGCATGTACTGCTCGGAGGTTGGGTTCTGCTCCGAGGTCGCCCCAACCGA31630.1020714403270933No Hit

[WARN]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)