FastQCFastQC Report
Thu 28 Jul 2022
EGAF00005110183

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005110183
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences2976833
Sequences flagged as poor quality0
Sequence length101
%GC48

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GGATTATACTGCCCCCCTTTTTGGCCAGGGGACCAAGCTGGAGATCAAAC96350.3236661243677425No Hit
ACCATATACTACGCAGACTCTGTGAAGGGCCGATTCACCATCTCCAGAGA93660.31462967522867424No Hit
GTATAATCCTGTAGACAGTAATAAGTTGCAACATCTTCAGGCTGCAGGCT85130.28597506141594103No Hit
CTCCTGGGAGTTACCCGATTGGAGGGCGTTATCCACCTTCCACTGTACTT82430.27690501952914387No Hit
GTAATATACAGCCGTGTCCTCGGCTCTCAGGCTGTTCATTTGCAGATACA79130.26581941277861404No Hit
CTCTAACACTCTCCCCTGTTGAAGCTCTTTGTGACGGGCGAGCTCAGGCC68320.22950565248369661No Hit
GTATATGGTACTACTACTACTACTAATGTATGAAATCCACTCCAGCCCCT56520.1898662101636202No Hit
GTATATTACTGTGCGAGACGTGGCCATGGGGTACGAGGGCTTGACTACTG47620.1599686646849185No Hit
CAACAGAGGCAGTTCCAGATTTCAACTGCTCATCAGATGGCGGGAAGATG44020.14787527550252233No Hit
CTCTGGGATAGAAGTTATTCAGCAGGCACACAACAGAGGCAGTTCCAGAT42250.14192935915451085No Hit
ATACTACGCAGACTCTGTGAAGGGCCGATTCACCATCTCCAGAGACAATG38310.12869381654933282No Hit
ACTTATTACTGTCTACAGGATTATACTGCCCCCCTTTTTGGCCAGGGGAC37500.12597280398329366No Hit
GTAATAAGTTGCAACATCTTCAGGCTGCAGGCTGCTGATGGTGAGAGTGA36660.12315101317406787No Hit
ATATACAGCCGTGTCCTCGGCTCTCAGGCTGTTCATTTGCAGATACAGTG36550.12278149294905022No Hit
TAGTAGTACCATATACTACGCAGACTCTGTGAAGGGCCGATTCACCATCT35840.12039640786029986No Hit
GGCGTAGACTTTGTGTTTCTCGTAGTCTGCTTTGCTCAGCGTCAGGGTGC34960.11744024606015857No Hit
GGGTTATCCTGGTATCAGCAGAAACCAGGGCAAGCCCCTACGCTCCTGAT34810.11693635484422539No Hit
GTCTACAGGATTATACTGCCCCCCTTTTTGGCCAGGGGACCAAGCTGGAG33020.11092325300075616No Hit
GCATGGAAATGAGGGTCCCCGCTCAGCTCCTGGGGCTCCTGCTGCTCTGG32950.11068810376665403No Hit
ATTCTGCATCCAGTTTGCAGTCGGGGGTCCCATCTCGGTTCAGTGGCAGT31470.10571637710278002No Hit
ATCCCAGAGAGGCCAAAGTACAGTGGAAGGTGGATAACGCCCTCCAATCG31390.105447635120949No Hit
CCACTGTACTTTGGCCTCTCTGGGATAGAAGTTATTCAGCAGGCACACAA31280.10507811489593134No Hit
CTACAGGATTATACTGCCCCCCTTTTTGGCCAGGGGACCAAGCTGGAGAT30630.10289458629355426No Hit
GTATGTAGACGGGGTACGTGCCAAGCATCCTCGTGCGACCGCGAGAGCCC30310.10181961836623016No Hit
GGTGTACACCCTGCCCCCATCCCGGGAGGAGATGACCAAGAACCAGGTCA29970.1006774649434483No Hit
ATCCTGTAGACAGTAATAAGTTGCAACATCTTCAGGCTGCAGGCTGCTGA29910.10047590845707502No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)