FastQCFastQC Report
Thu 28 Jul 2022
EGAF00005110184

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005110184
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences2976833
Sequences flagged as poor quality0
Sequence length101
%GC48

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GGATTATACTGCCCCCCTTTTTGGCCAGGGGACCAAGCTGGAGATCAAAC109510.36787418037894637No Hit
ACCATATACTACGCAGACTCTGTGAAGGGCCGATTCACCATCTCCAGAGA92620.31113602946487084No Hit
GTATAATCCTGTAGACAGTAATAAGTTGCAACATCTTCAGGCTGCAGGCT91470.3072728634760499No Hit
GTAATATACAGCCGTGTCCTCGGCTCTCAGGCTGTTCATTTGCAGATACA79800.26807012687644893No Hit
CTCCTGGGAGTTACCCGATTGGAGGGCGTTATCCACCTTCCACTGTACTT77510.26037738764653573No Hit
CTCTAACACTCTCCCCTGTTGAAGCTCTTTGTGACGGGCGAGCTCAGGCC54560.18328203160876005No Hit
GTATATGGTACTACTACTACTACTAATGTATGAAATCCACTCCAGCCCCT47610.15993507193718962No Hit
GTATATTACTGTGCGAGACGTGGCCATGGGGTACGAGGGCTTGACTACTG44670.1500588041048994No Hit
ACTTATTACTGTCTACAGGATTATACTGCCCCCCTTTTTGGCCAGGGGAC43800.147136235052487No Hit
GTAATAAGTTGCAACATCTTCAGGCTGCAGGCTGCTGATGGTGAGAGTGA41260.1386036771293519No Hit
CAACAGAGGCAGTTCCAGATTTCAACTGCTCATCAGATGGCGGGAAGATG40300.13537877334737958No Hit
CTCTGGGATAGAAGTTATTCAGCAGGCACACAACAGAGGCAGTTCCAGAT39700.13336320848364688No Hit
GTGTACACCTGTGGTTCTCGGGGCTGCCCTTTGGCTTTGGAGATGGTTTT39410.13238901879950943No Hit
ATATACAGCCGTGTCCTCGGCTCTCAGGCTGTTCATTTGCAGATACAGTG37540.12610717497420917No Hit
ATACTACGCAGACTCTGTGAAGGGCCGATTCACCATCTCCAGAGACAATG36870.12385646087637431No Hit
GTCTACAGGATTATACTGCCCCCCTTTTTGGCCAGGGGACCAAGCTGGAG36770.12352053339908554No Hit
GCATGGAAATGAGGGTCCCCGCTCAGCTCCTGGGGCTCCTGCTGCTCTGG36190.12157215403081059No Hit
GTATGTAGACGGGGTACGTGCCAAGCATCCTCGTGCGACCGCGAGAGCCC34470.11579420142144353No Hit
TAGTAGTACCATATACTACGCAGACTCTGTGAAGGGCCGATTCACCATCT33920.11394660029635521No Hit
CTACAGGATTATACTGCCCCCCTTTTTGGCCAGGGGACCAAGCTGGAGAT33640.11300600335994664No Hit
ATCCCAGAGAGGCCAAAGTACAGTGGAAGGTGGATAACGCCCTCCAATCG33480.11246851939628458No Hit
GTAGGAGACAGAGTCACCATCACCTGCCGGACAAGTCAGGGCATTAGCAA32320.1085717606597347No Hit
ATCCTGTAGACAGTAATAAGTTGCAACATCTTCAGGCTGCAGGCTGCTGA31910.10719445800285068No Hit
GTACGTGCTGTTGTACTGCTCCTCCCGCGGCTTTGTCTTGGCATTATGCA30920.10386877597769173No Hit
GGCGTAGACTTTGTGTTTCTCGTAGTCTGCTTTGCTCAGCGTCAGGGTGC30450.10228991683443445No Hit
GTTGGAGACCTTGCACTTGTACTCCTTGCCATTCAGCCAGTCCTGGTGCA29950.10061027944799053No Hit
CCTGTAGACAGTAATAAGTTGCAACATCTTCAGGCTGCAGGCTGCTGATG29890.10040872296161728No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)