FastQCFastQC Report
Sun 7 Aug 2022
EGAF00005110270

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005110270
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences3453339
Sequences flagged as poor quality0
Sequence length101
%GC50

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GTAATAGACGGCCGTGTCCTCAGATTTCAGGCTGCTCAGCTCCATGTAGA105770.306283281195388No Hit
TCCTAGGTCAGCCCAAGGCTGCCCCCTCGGTCACTCTGTTCCCGCCCTCC80850.2341212374458459No Hit
GTCATAGGTGGTCAGGTCTGTGACCAGGCAGGTCAACTTGGTGGACTTGG79820.231138616857482No Hit
TGCACACACAGAGCGGCCAGCCGCCCCGAGCCTGTGGGCAGGCCAGCAGG59370.17192056731181038No Hit
GTCTATTACTGTGCGAGAGATTGTGGTGGTGGTGACTTCATTATTTTGGG55610.16103255429021016No Hit
TCTCAGGACTGATGGGAAGCCCCGGGTGCTGCTGATGTCAGAGTTGTTCT52610.15234530985808228No Hit
CTATATGCACTGGGTGCGACAGGCCCCTGGACAAGGGCTTGAGTGGATGG49540.14345536305587142No Hit
GTCTACATGGAGCTGAGCAGCCTGAAATCTGAGGACACGGCCGTCTATTA47270.13688201476889467No Hit
GTTTGGAGGGTGTGGTGGTCTCCACTCCCGCCTTGACGGGGCTGCTATCT45330.131264263369452No Hit
CCTATGAACATTCTGTAGGGGCCACTGTCTTCTCCACGGTGCTCCCTTCA44590.12912140974286046No Hit
GACCTAGGACGGTCAACTTGGTCCCTCCGCCGAACACCACATGAATGCCA43820.12689168367194764No Hit
GTGCAGGGCCACCCCCTTGGGCCGGGAGATGGTCTGCTTCAGTGGCGAGG40540.11739362975948785No Hit
CCTCTGAGGAGCTTCAAGCCAACAAGGCCACACTGGTGTGTCTCATAAGT38470.11139943110131961No Hit
GGTGTAGGTCTCCCCCGTGTTCCATTCCTCTTCGGACACGGTCAGGATGC37150.10757704355118336No Hit
GGTTTATTGAGTGCAGGGAGAAGGGCTTGATGCCTTGGGGTGGGAGGAGA36790.10653457421932802No Hit
GTGTGGTGGTCTCCACTCCCGCCTTGACGGGGCTGCTATCTGCCTTCCAG35760.10355195363096412No Hit
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG35640.103204463853679No Hit
GACTATTACTGTCAGACCTGGGGCACTGGCATTCATGTGGTGTTCGGCGG35450.1026542717063109No Hit
GTGCAGGGAGAAGGGCTTGATGCCTTGGGGTGGGAGGAGAGACCCCTCCC35330.10230678192902579No Hit
GTCTGGGGCTGAGGTGAAGAAGCCTGGGGCCTCAGTGAAGGTTTCCTGCA35130.10172763230021727No Hit
GATATGAATACCTCCCAAAATAATGAAGTCACCACCACCACAATCTCTCG34690.10045350311683851No Hit

[WARN]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)