FastQCFastQC Report
Thu 28 Jul 2022
EGAF00005110440

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005110440
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences6134641
Sequences flagged as poor quality0
Sequence length101
%GC46

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG843701.3753046021763946No Hit
GTATAATAACTGGCCTCTCTTCGGCCCAGGGACACGACTGGAGATTAAAC117770.19197537394608746No Hit
CTCCTGGGAGTTACCCGATTGGAGGGCGTTATCCACCTTCCACTGTACTT92180.15026144154156698No Hit
ACTAAATACTATGCAGACTCCGTGAAGGGCCGATTCACCATCTCCAGAGA65100.10611867915335225No Hit
CTCTAACACTCTCCCCTGTTGAAGCTCTTTGTGACGGGCGAGCTCAGGCC61750.10065788690813365No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)