FastQCFastQC Report
Mon 8 Aug 2022
EGAF00005110524

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005110524
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences6639392
Sequences flagged as poor quality0
Sequence length101
%GC47

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG877141.3211149454648858No Hit
CTCCTGGGAGTTACCCGATTGGAGGGCGTTATCCACCTTCCACTGTACTT109730.1652711573589871No Hit
CTCTAACACTCTCCCCTGTTGAAGCTCTTTGTGACGGGCGAGCTCAGGCC72200.10874489712311007No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)