FastQCFastQC Report
Wed 20 Apr 2022
EGAF00005110590

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005110590
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences51793212
Sequences flagged as poor quality0
Sequence length151
%GC41

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CGCCGTA54400.06.769263755-59
TCGCCGT69950.05.45098155-59
GCGTCGT196350.05.317117145
GTCGTGT221650.05.2662663145
AGATCGG336650.05.2332597145
AGCGTCG213900.05.1859136145
CGTCGTG197750.05.096159145
Produced by FastQC (version 0.11.5)