FastQCFastQC Report
Wed 20 Apr 2022
EGAF00005110632

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005110632
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences68196951
Sequences flagged as poor quality0
Sequence length151
%GC41

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
AGCGTCG236750.011.637099
GAGCGTC306700.09.0304558
AGAGCGT347450.08.1588427
ATCGGAA361950.07.7851471
CGCCGTA77800.07.6778255-59
TCGGAAG383850.07.36719042
CGGAAGA414300.06.80717563
AAGAGCG429550.06.5487726
TCGCCGT99550.06.21880555-59
GCCGTAT113100.05.71732155-59
GTCGCCG116200.05.240388455-59
Produced by FastQC (version 0.11.5)