FastQCFastQC Report
Wed 20 Apr 2022
EGAF00005110784

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005110784
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences187272669
Sequences flagged as poor quality0
Sequence length151
%GC42

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CGCCGTA386650.06.127298455-59
GCGTCGG174100.05.9146056145
TCGCCGT446800.05.383542555-59
GCCGTAT457300.05.332854355-59
AGCGTCG1644950.05.00171239
Produced by FastQC (version 0.11.5)