FastQCFastQC Report
Wed 20 Apr 2022
EGAF00005110802

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005110802
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences73887696
Sequences flagged as poor quality0
Sequence length151
%GC41

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
AGCGTCG250200.012.9218299
CGCCGTA67200.010.46479455-59
GAGCGTC317850.010.1715358
AGAGCGT358750.08.9917567
ATCGGAA391350.08.2909131
TCGCCGT88700.08.12439555-59
TCGGAAG407800.08.0721482
AAGAGCG439750.07.61570266
CGGAAGA438550.07.45472863
GTCGCCG102350.07.111711555-59
GCCGTAT106250.07.014430555-59
CGACGTT107350.06.523384630-34
TCGACGT111350.06.22394330-34
TGGTCGC124600.06.120680350-54
GTCGACG117100.05.794512330-34
GTGGTCG139050.05.52633150-54
GGTCGCC127900.05.49798150-54
CCGTATC131400.05.44013755-59
AGATCGG377700.05.41621145
GATCGGA340650.05.409022145
Produced by FastQC (version 0.11.5)