FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005110852

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005110852
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences51691649
Sequences flagged as poor quality0
Sequence length151
%GC41

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
AGCGTCG183850.013.4076499
GAGCGTC231350.010.9694978
AGAGCGT272500.09.4460997
CGCCGTA60200.08.91064755-59
ATCGGAA287300.08.7041541
TCGGAAG302450.08.3906732
AAGAGCG335350.07.89177566
CGGAAGA330900.07.8661743
TCGCCGT75850.07.11035755-59
GTCGCCG86550.06.36532555-59
GCCGTAT87950.06.329937555-59
CCGTATC107750.05.180211555-59
TGGTCGC109000.05.16070950-54
CGTCGTG171450.05.159105145
CGTATCA114600.05.073065360-64
Produced by FastQC (version 0.11.5)