FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005111057

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005111057
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences57709437
Sequences flagged as poor quality0
Sequence length151
%GC41

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
ATCGGAA331800.017.9311811
TCGGAAG344600.017.3763792
CGGAAGA364850.016.4104863
TATGCCG108150.011.69262845-49
CGTATGC129400.09.68281645-49
CTCGTAT131100.09.65556240-44
ACGGATC120550.09.44270235-39
AGAGCAC680700.09.1154227
TCTCGTA127900.09.06954440-44
ATGCCGT142000.09.01767445-49
TACGGAT126450.08.95624635-39
CGGATCT128600.08.94182435-39
AGCACAC721250.08.793899
GAGCACA727550.08.7675578
TGCCGTC151350.08.42225945-49
TCGTATG149700.08.40744340-44
CTTACGG148050.08.38393830-34
GAAGAGC765350.08.2397685
GCCGTCT155900.08.07447150-54
TTACGGA159300.07.946800735-39
Produced by FastQC (version 0.11.5)