FastQCFastQC Report
Wed 20 Apr 2022
EGAF00005111082

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005111082
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences66395261
Sequences flagged as poor quality0
Sequence length151
%GC41

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[WARN]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
AGCGTCG216500.07.2231879
CGCCGTA59250.06.41557255-59
GCGTCGG47001.09139364E-105.9132032145
GAGCGTC286100.05.71666438
GATCGGA311450.05.413553145
TCGTCGT26259.521761E-45.2937245145
GCGTCGT199100.05.2578306145
AGAGCGT326350.05.1212867
ATCGGAA342600.05.110623145
TAGATCG136100.05.1050797145
CGTCGTG198850.05.0780888145
TCGCCGT76450.05.028461555-59
Produced by FastQC (version 0.11.5)