FastQCFastQC Report
Wed 20 Apr 2022
EGAF00005111084

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005111084
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences67099936
Sequences flagged as poor quality0
Sequence length151
%GC41

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
AGCGTCG238750.06.92453679
CGCCGTA60450.06.18699155-59
GAGCGTC306500.05.6541168
AGATCGG388700.05.409464145
CGTCGTG223050.05.3635516145
GATCGGA354400.05.2987914145
TCGCCGT78200.05.097791755-59
Produced by FastQC (version 0.11.5)