FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005111096

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005111096
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences47973579
Sequences flagged as poor quality0
Sequence length151
%GC42

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CGCCGTA63400.06.99796455-59
TCGCCGT78550.05.759011355-59
AGCGTCG295650.05.5674719
CGTCGTG275500.05.4206514145
GCGTCGT278950.05.405587145
GATCGGA420100.05.384034145
GCGTCGG40406.888513E-95.203823145
AGATCGG451950.05.1650124145
GCCGTAT87900.05.12992555-59
GTCGCCG88850.05.091393555-59
GTCGTGT291900.05.016758145
Produced by FastQC (version 0.11.5)