FastQCFastQC Report
Wed 20 Apr 2022
EGAF00005111210

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005111210
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences68373671
Sequences flagged as poor quality0
Sequence length151
%GC41

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
AGCGTCG299050.024.9788179
GAGCGTC363800.020.7323788
AGAGCGT409200.018.5514147
ATCGGAA432950.017.4360331
TCGGAAG449700.016.834832
CGGAAGA481950.015.703413
AAGAGCG487100.015.6141126
CGCCGTA113050.014.00335155-59
TCGCCGT132150.012.04523155-59
GCCGTAT147800.010.93655155-59
GTCGCCG148350.010.79828255-59
TCGATCG155750.09.972095530-34
TGGTCGC168100.09.72010150-54
CGATCGG156500.09.67411330-34
CCGTATC170750.09.3901955-59
GTGGTCG182500.09.04847650-54
GGTCGCC177850.09.04049650-54
CGTATCA183100.08.92303260-64
CGGTGTA192000.08.427635-39
GAAGAGC953200.08.3965735
Produced by FastQC (version 0.11.5)