FastQCFastQC Report
Thu 16 Jun 2022
EGAF00005111233

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005111233
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences72240735
Sequences flagged as poor quality0
Sequence length151
%GC41

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GATCGGAAGAGCACACGTCTGAACTCCAGTCACGACCGATAATCTCGTAT2987010.4134800123503726TruSeq Adapter, Index 18 (97% over 38bp)
ATCGGAAGAGCACACGTCTGAACTCCAGTCACGACCGATAATCTCGTATG1086530.15040406219565733TruSeq Adapter, Index 18 (97% over 37bp)

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)