FastQCFastQC Report
Wed 20 Apr 2022
EGAF00005111337

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005111337
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences68607498
Sequences flagged as poor quality0
Sequence length151
%GC41

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
ATCGGAA319350.08.5475521
TCGGAAG339650.08.0905412
CGGAAGA361250.07.74614143
TATGCCG108000.07.51783145-49
CGTATGC127650.06.63315745-49
CTCGTAT127850.06.52085440-44
TCTCGTA133450.05.986464540-44
ATGCCGT146600.05.755953345-49
GCCGTCT154500.05.405340750-54
Produced by FastQC (version 0.11.5)