FastQCFastQC Report
Tue 26 Jul 2022
EGAF00005111620

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005111620
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences2230377
Sequences flagged as poor quality0
Sequence length101
%GC46

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG146000.6545978549814673No Hit
GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT40970.18369091862048434No Hit
GTATCAACGCAGAGTACGGGGTGACTGGAATTCTGCTGAAAGGGAGATCG28800.12912615221552232No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)