FastQCFastQC Report
Thu 28 Jul 2022
EGAF00005111726

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005111726
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences3144662
Sequences flagged as poor quality0
Sequence length101
%GC45

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG345621.0990688347428117No Hit
GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT60060.1909903194683562No Hit
GTATCAACGCAGAGTACGGGGTGACTGGAATTCTGCTGAAAGGGAGATCG37650.11972669876762589No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)