FastQCFastQC Report
Thu 28 Jul 2022
EGAF00005111816

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005111816
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences3152595
Sequences flagged as poor quality0
Sequence length101
%GC46

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG373701.185372685042005No Hit
GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT52070.1651655223712529No Hit
GTATCAACGCAGAGTACGGGGTGACTGGAATTCTGCTGAAAGGGAGATCG34720.11013149484789515No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)