FastQCFastQC Report
Thu 28 Jul 2022
EGAF00005112311

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005112311
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences3579260
Sequences flagged as poor quality0
Sequence length101
%GC45

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT83640.23367958740074762No Hit
GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT41510.11597369288623906No Hit
GTATTAGAGGCACCGCCTGCCCAGTGACACATGTTTAACGGCCGCGGTAC37680.10527315702128373No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)